Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885122.1_cds_XP_016439075.1_34667
CDS Infomation

[gene=LOC107765020] [db_xref=GeneID:107765020] [protein=rust resistance kinase Lr10-like] [protein_id=XP_016439075.1] [location=complement(join(3793..4883,5049..5081,5233..5253,5664..6441))] [gbkey=CDS]
Sequence

ATGTTGGCAGTCAGACAGCTCCAATTAGCGACTCTTGTACTACTTGTGATCTGCAGCACA
ACAATATCCAAAGCCCAAAATATTACTCAGTGCACTTCTTCTTGTGGTGATATTCATAAC
ATCACCTTTCCATTTCGATTGAAAGCTGATCCCAAGAATTGCGGAAATTCTAGGTTCCAG
CTCGATTGCCAGAATAATCGTACTGTCATAAGTTTGGAGTCAAGGACATATAACGTGTTG
GAAATCAACTATGATAAATTCTTGATCAGAGCAATTGACCCTGGTTTGCTGAATCAGACC
ACGAACTGCACTTTTTCTCCGAAGTACTTCACCACAGCTGTTCCTGGCACCTCAACTTTT
AACGATTTAGCTCTCAACATTCCCATTATATATGTCAATTGTTTAGCCATGGTAAACTCT
TCGCGCTATGTGGAGACTACTTTCTGCGGATCACAGAACAATACTTCTTTCTTTAATTAT
TCACAAAGTCATAGCTATGTGGCCATAGGAGAGGACATGTCGATTTCGGATTTGGCAGAG
AGTTGCAGCGTGGAAATAGTAGCCTGGGCGTCGGCTCGTGGGCTTTCGGGTAACAATACT
TCTCTATCGAGCATTCAGGATGCCCTGAGTTACGGGTCTGAGCTTTCTTGGAAGCGTACC
TTCTTGTGTAGAGAATGTCAAGACTACTGTTTTTCTGAAGGCAACGACTACCGTTGCAGC
CGCAACAATAGGCACTTGCGCTGCGACGATGGCAGCCCCTTTGATCTTCCCCTCCCTTGT
AGCATCCACTTGCATGGAGTTCTTACTATAATATTTGGCGGATTTGGTATAGCTGCAATT
CTGTCATTCCGATTTCTCTTTGGATTGGTTTTCCTGGTTGCATTAATAGTGTACAGATGG
AGAAGACGGCACTTATCTATGTATCAATCAATTGAAGACTTCCTGCAAATCCAAAGCAAC
CTTGTGCCAATTAAGTACTCCTATTCTGAGATTAAGAAGATGACGAATAAATTCAAGGAA
AAACTTGGCGAAGGAGCCTATGGAACTGTCTTTAAAGGAAAGCTCCGTAGTGGTCCTTTT
GTTGCAGTAAAGATTATGCACAAGTCCATGACTAGTGGGGAAGAATTTATCAGTGAAGTT
TCCACAATTGGAAGGATTCACCATGTAAATGTTGTGCAGCTCATTGGATTCTGCGTTGAG
GGCTCAAAACGTGCTTTGGTATATGACTTCATGCCTAATAGCTCCTTGGACAAGTACATA
TTTCCGCAAGAAGGAATTGTTTCCTTGAGTTACAAACAAATGTTCGAGATATCTCTAGGA
GTTGCTCGTGGGATAGACTATCTACATCGGGGGTGTGACATGCAGATCTTACATTTTGAT
ATAAAGCCTCACAACATTCTTCTGGATGAAAATTTCAATCCAAGAATATCTGACTTTGGG
CTTGCAAAATTGTACCCAACAGATGATAGTATTGTGACTCTAACTGCAGCTAGAGGGACA
GTGGGTTACATGGCTCCGGAGTTGTTCTATAAAAATATTGGAGGAGTGTCATACAAAGCC
GATGTATATAGTTATGGTATGTTGTTGATGGAAATGGCAGGCAGAAGGAAGAACATGAAC
CCATTTGCGGATCATTTAAGCCAAATTTACTTTCCTACATGGGTTTACGACCAATTTAAT
GAAGGAAATGATATAGAGATGCAGGACGCCAGCGAGGAAGATAGGAAGATGGTAAAGAAG
ATAATATTTGTGGCATTGTGGTGCATACAGATGAAGCCTGTTGATCGTCCTGCAATGAAC
AAAGTTGTTGAAATGCTTGAAGGAGATGTTCAACTCCTACAGATGCCCCCTAGACCTTTT
ATATCTCCTCGTGAGATTGCCGGGGATGTTATCGAGACAATAAAAATTTCCACGGAGGTA
TAG

Peptide Sequence

PEP ID

XP_016439075.1
PEP Infomation

PREDICTED: rust resistance kinase Lr10-like [Nicotiana tabacum]
Sequence

MLAVRQLQLATLVLLVICSTTISKAQNITQCTSSCGDIHNITFPFRLKADPKNCGNSRFQ
LDCQNNRTVISLESRTYNVLEINYDKFLIRAIDPGLLNQTTNCTFSPKYFTTAVPGTSTF
NDLALNIPIIYVNCLAMVNSSRYVETTFCGSQNNTSFFNYSQSHSYVAIGEDMSISDLAE
SCSVEIVAWASARGLSGNNTSLSSIQDALSYGSELSWKRTFLCRECQDYCFSEGNDYRCS
RNNRHLRCDDGSPFDLPLPCSIHLHGVLTIIFGGFGIAAILSFRFLFGLVFLVALIVYRW
RRRHLSMYQSIEDFLQIQSNLVPIKYSYSEIKKMTNKFKEKLGEGAYGTVFKGKLRSGPF
VAVKIMHKSMTSGEEFISEVSTIGRIHHVNVVQLIGFCVEGSKRALVYDFMPNSSLDKYI
FPQEGIVSLSYKQMFEISLGVARGIDYLHRGCDMQILHFDIKPHNILLDENFNPRISDFG
LAKLYPTDDSIVTLTAARGTVGYMAPELFYKNIGGVSYKADVYSYGMLLMEMAGRRKNMN
PFADHLSQIYFPTWVYDQFNEGNDIEMQDASEEDRKMVKKIIFVALWCIQMKPVDRPAMN
KVVEMLEGDVQLLQMPPRPFISPREIAGDVIETIKISTEV

Transcript Sequence

Gene sequence data has not been registered.